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API
Archetypal Analysis
partipy.AA
Pareto Task Inference
partipy.set_obsm
partipy.compute_archetypes
partipy.compute_selection_metrics
partipy.summarize_aa_metrics
partipy.compute_bootstrap_variance
partipy.compute_t_ratio
partipy.get_aa_result
partipy.t_ratio_significance
Enrichment
partipy.compute_archetype_expression
partipy.compute_archetype_weights
partipy.compute_meta_enrichment
partipy.extract_enriched_processes
partipy.extract_specific_processes
Plotting
partipy.barplot_enrichment_comparison
partipy.barplot_functional_enrichment
partipy.barplot_meta_enrichment
partipy.heatmap_meta_enrichment
partipy.plot_archetypes_2D
partipy.plot_archetypes_3D
partipy.plot_bootstrap_2D
partipy.plot_bootstrap_3D
partipy.plot_bootstrap_variance
partipy.plot_IC
partipy.plot_var_explained
partipy.radarplot_meta_enrichment
Tutorials
Archetypal Analysis
Quickstart
Cross-Condition Analysis
Spatial Omics Analysis
Archetype Crosstalk Network
Accessing, Saving, and Reloading Cached Results
Changelog
References
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